Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.54' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylocapsa aurea KYG, or try another query

DL86_RS14335 WP_036262823.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

PP5278 / Q88CA3: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas putida

 45% id,
94% cov

kauB / Q9HTP2: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54; EC 1.2.1.19) from Pseudomonas aeruginosa

 44% id,
94% cov

PS417_27745: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas simiae

 43% id,
94% cov

More...

DL86_RS09925 WP_036260778.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

PfGW456L13_805: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens

 31% id,
94% cov

Pf6N2E2_4383: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens

 32% id,
90% cov

PS417_27745: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas simiae

 30% id,
94% cov

More...

putA DL86_RS17780 WP_036264374.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:		 PaperBLAST

PfGW456L13_805: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens

 30% id,
93% cov

PS417_27745: gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas simiae

 29% id,
95% cov

PP5278 / Q88CA3: 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas putida

 29% id,
94% cov

More...

DL86_RS09565 WP_051953139.1: coniferyl aldehyde dehydrogenase
is similar to:		 PaperBLAST

ADH1B_MAIZE / G5DDC2: Aminoaldehyde dehydrogenase 1b; ZmAMADH1b; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH1b; Aminobutyraldehyde dehydrogenase AMADH1b; Betaine aldehyde dehydrogenase AMADH1b; Gamma-guanidinobutyraldehyde dehydrogenase AMADH1b; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Zea mays

 28% id,
87% cov

BADH1_ARATH / Q9S795: Aminoaldehyde dehydrogenase ALDH10A8, chloroplastic; 4-trimethylammoniobutyraldehyde dehydrogenase ALDH10A8; Aldehyde dehydrogenase family 10 member A8; Aminobutyraldehyde dehydrogenase ALDH10A8; Betaine aldehyde dehydrogenase ALDH10A8; Gamma-guanidinobutyraldehyde dehydrogenase ALDH10A8; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.8; EC 1.2.1.54 from Arabidopsis thaliana

 28% id,
84% cov

AADH2_SOLLC / B6ECN9: Aminoaldehyde dehydrogenase 2; SlAMADH2; 4-trimethylammoniobutyraldehyde dehydrogenase AMADH2; Aminobutyraldehyde dehydrogenase AMADH2; Gamma-guanidinobutyraldehyde dehydrogenase AMADH2; EC 1.2.1.-; EC 1.2.1.47; EC 1.2.1.19; EC 1.2.1.54 from Solanum lycopersicum

 28% id,
86% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory