Curated BLAST
Searching in Methylocapsa aurea KYG (GCF_000746085.1)
Found 10 curated entries in PaperBLAST's database that match '1.2.1.71' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Methylocapsa aurea KYG, or try another query
DL86_RS14335 WP_036262823.1: aldehyde dehydrogenase family protein is similar to: | PaperBLAST |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa | 32% id, 92% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 32% id, 92% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 31% id, 93% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli | 31% id, 91% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 30% id, 92% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 29% id, 91% cov |
More... |
putA DL86_RS17780 WP_036264374.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA is similar to: | PaperBLAST |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 30% id, 96% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa | 29% id, 97% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 31% id, 89% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli | 29% id, 96% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 28% id, 97% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 28% id, 98% cov |
More... |
DL86_RS09925 WP_036260778.1: aldehyde dehydrogenase family protein is similar to: | PaperBLAST |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 31% id, 90% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 31% id, 90% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa | 29% id, 93% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 30% id, 89% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli | 30% id, 90% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 28% id, 92% cov |
More... |
DL86_RS09565 WP_051953139.1: coniferyl aldehyde dehydrogenase is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 28% id, 85% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 26% id, 87% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa astD: succinylglutamate-semialdehyde dehydrogenase; EC 1.2.1.71 from Pseudomonas aeruginosa | 27% id, 83% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 27% id, 83% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli YdjU / b1746: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli astD / RF|NP_416260.1: N-succinylglutamate 5-semialdehyde dehydrogenase; EC 1.2.1.71 from Escherichia coli astD / P76217: aldehyde dehydrogenase (EC 1.2.1.71) from Escherichia coli | 27% id, 84% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 30% id, 67% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory