Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 7 curated entries in PaperBLAST's database that match '4.1.2.5' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylocapsa aurea KYG, or try another query

DL86_RS03570 WP_036258293.1: low specificity L-threonine aldolase
is similar to:
PaperBLAST

PfGW456L13_1114: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens

42% id,
89% cov

AO353_07670: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens

40% id,
90% cov

Q88R13: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas putida

40% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory