Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 48 curated entries in PaperBLAST's database that match '4.1.3.1' as complete word(s).

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylocapsa aurea KYG, or try another query

DL86_RS16640 WP_051953617.1: isocitrate lyase
is similar to:
PaperBLAST

Q9I0K4: isocitrate lyase (EC 4.1.3.1) from Pseudomonas aeruginosa

78% id,
100% cov

A8C781: isocitrate lyase (EC 4.1.3.1) from Azotobacter vinelandii

77% id,
100% cov

Psest_2014: Isocitrate lyase (EC 4.1.3.1) from Pseudomonas stutzeri

76% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory