Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 45 curated entries in PaperBLAST's database that match '4.4.1.13' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Methylocapsa aurea KYG, or try another query

metC DL86_RS08955 WP_036260610.1: cystathionine beta-lyase
is similar to:		 PaperBLAST

METC_YEAST / P43623: Putative cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; Increased recombination centers protein 7; EC 4.4.1.13 from Saccharomyces cerevisiae
IRC7 / P43623: cysteine-S-conjugate β-lyase monomer (EC 4.4.1.13; EC 4.4.1.1) from Saccharomyces cerevisiae
P43623: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Saccharomyces cerevisiae

 58% id,
99% cov

METC_ECOLI / P06721: Cystathionine beta-lyase MetC; CBL; CL; Beta-cystathionase MetC; Cysteine desulfhydrase MetC; CD; Cysteine lyase MetC; Cysteine-S-conjugate beta-lyase MetC; EC 4.4.1.13; EC 4.4.1.28 from Escherichia coli
MetC / b3008: cystathionine β-lyase / L-cysteine desulfhydrase / alanine racemase (EC 4.4.1.13; EC 4.4.1.1; EC 4.4.1.28; EC 5.1.1.1) from Escherichia coli
metC / P06721: cystathionine β-lyase / L-cysteine desulfhydrase / alanine racemase (EC 4.4.1.13; EC 4.4.1.1; EC 5.1.1.10) from Escherichia coli

 43% id,
99% cov

Q73GL9: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); alanine racemase (EC 5.1.1.1); glutamate racemase (EC 5.1.1.3) from Wolbachia pipientis

 41% id,
98% cov

More...

DL86_RS11325 WP_036261369.1: PLP-dependent transferase
is similar to:		 PaperBLAST

Q9X0Z7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); alanine racemase (EC 5.1.1.1); glutamate racemase (EC 5.1.1.3) from Thermotoga maritima

 39% id,
97% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 37% id,
95% cov

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 35% id,
93% cov

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DL86_RS12460 WP_036261931.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 36% id,
98% cov

METC_BACSU / O31632: Cystathionine beta-lyase MetC; CBL; Beta-cystathionase MetC; Cysteine lyase MetC; Cysteine-S-conjugate beta-lyase MetC; EC 4.4.1.13 from Bacillus subtilis

 37% id,
96% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 37% id,
93% cov

More...

DL86_RS11750 WP_051953261.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:		 PaperBLAST

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 33% id,
83% cov

METC_BACSU / O31632: Cystathionine beta-lyase MetC; CBL; Beta-cystathionase MetC; Cysteine lyase MetC; Cysteine-S-conjugate beta-lyase MetC; EC 4.4.1.13 from Bacillus subtilis

 32% id,
83% cov

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 43% id,
41% cov

More...

DL86_RS01165 WP_036257360.1: cysteine synthase A
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 41% id,
67% cov

cysK DL86_RS08245 WP_036260308.1: cysteine synthase A
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 42% id,
66% cov

DL86_RS08255 WP_036260103.1: PLP-dependent transferase
is similar to:		 PaperBLAST

Q9X0Z7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13); alanine racemase (EC 5.1.1.1); glutamate racemase (EC 5.1.1.3) from Thermotoga maritima

 28% id,
94% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 44% id,
55% cov

METC_COXBU / Q83A83: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Coxiella burnetii

 39% id,
59% cov

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DL86_RS11215 WP_036261431.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

CBL_THET8 / Q5SHW0: Cystathionine beta-lyase; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Thermus thermophilus

 26% id,
94% cov

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

 27% id,
94% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

 27% id,
85% cov

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DL86_RS02895 WP_036257785.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

KAT1_HUMAN / Q16773: Kynurenine--oxoglutarate transaminase 1; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; Kynurenine--oxoglutarate transaminase I; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Homo sapiens
CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

 25% id,
93% cov

CCBL2 / Q6YP21: Kynurenine--oxoglutarate transaminase 3 (EC 2.6.1.7; EC 4.4.1.13) from Homo sapiens
Q6YP21: kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Homo sapiens

 26% id,
86% cov

KAT1_RAT / Q08415: Kynurenine--oxoglutarate transaminase 1; Kynurenine--oxoglutarate transaminase I; Cysteine-S-conjugate beta-lyase; Glutamine transaminase K; GTK; Glutamine--phenylpyruvate transaminase; Kynurenine aminotransferase 1; Kynurenine aminotransferase I; KATI; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64 from Rattus norvegicus

 24% id,
92% cov

More...

DL86_RS04340 WP_036258472.1: cysteine desulfurase
is similar to:		 PaperBLAST

A0A0M3VI47: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Mimosa pudica

 26% id,
37% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 25% id,
32% cov

cobD DL86_RS16360 WP_036263599.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

SUR1 / Q9SIV0: alkyl-thiohydroximate C-S lyase (EC 4.4.1.13) from Arabidopsis thaliana

 26% id,
30% cov

DL86_RS10215 WP_036260937.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

METC_ARATH / P53780: Cystathionine beta-lyase, chloroplastic; CBL; Beta-cystathionase; Cysteine lyase; Cysteine-S-conjugate beta-lyase; EC 4.4.1.13 from Arabidopsis thaliana
CBL1 / P53780: cystathionine β-lyase monomer (EC 4.4.1.13) from Arabidopsis thaliana

 29% id,
20% cov

guaB DL86_RS09365 WP_036260661.1: IMP dehydrogenase
is similar to:		 PaperBLAST

Q9EYM7: cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Streptomyces venezuelae

 30% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory