Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylocapsa aurea KYG, or try another query

trpE DL86_RS01210 WP_036257365.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

58% id,
100% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

45% id,
94% cov

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

43% id,
97% cov

More...

pabB DL86_RS17645 WP_036264332.1: aminodeoxychorismate synthase component I
is similar to:
PaperBLAST

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

38% id,
93% cov

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

34% id,
98% cov

TRPE_YEAST / P00899: Anthranilate synthase component 1; Anthranilate synthase component I; EC 4.1.3.27 from Saccharomyces cerevisiae

40% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory