Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylocapsa aurea KYG (GCF_000746085.1)

Found 1 curated entries in PaperBLAST's database that match 'small subunit of acetolactate synthase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylocapsa aurea KYG, or try another query

ilvN DL86_RS17400 WP_036264249.1: acetolactate synthase small subunit
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans

44% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

52475-53056 (frame -2) on NZ_KN050805.1 Methylocapsa aurea strain KYG DL86DRAFT_scaffold00005.5, whole genome shotgun sequence
is similar to:
PaperBLAST

AN4430: small subunit of acetolactate synthase from Emericella nidulans
Also see hits to annotated proteins above

42% id,
38% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory