Curated BLAST for Genomes

 

Curated BLAST

Searching in Tatumella morbirosei LMG 23360 (GCF_000757425.2)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Tatumella morbirosei LMG 23360, or try another query

glk HA49_RS08260 HA49_16870 WP_038021988.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

76% id,
100% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

39% id,
99% cov

A0A3G4RI75: glucokinase (EC 2.7.1.2) from Methylomonas methanica

32% id,
99% cov

More...

galK HA49_RS01155 HA49_09365 WP_038019589.1: galactokinase
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

60% id,
99% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

48% id,
97% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

45% id,
92% cov

HA49_RS15320 HA49_09130 WP_038019118.1: ROK family protein
is similar to:
PaperBLAST

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

30% id,
97% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

30% id,
97% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

28% id,
99% cov

More...

HA49_RS03535 HA49_11810 WP_038020883.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

29% id,
98% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

29% id,
94% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

27% id,
97% cov

More...

HA49_RS04420 HA49_12750 WP_038020708.1: ROK family transcriptional regulator
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

26% id,
97% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

25% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory