Curated BLAST for Genomes

 

Curated BLAST

Searching in Tatumella morbirosei LMG 23360 (GCF_000757425.2)

Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%alpha' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Tatumella morbirosei LMG 23360, or try another query

HA49_RS12235 HA49_05895 WP_038017795.1: (2Fe-2S)-binding protein
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

69% id,
98% cov

HA49_RS11475 HA49_05075 WP_038017475.1: (2Fe-2S)-binding protein
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

54% id,
96% cov

HA49_RS06300 HA49_14775 WP_038021268.1: (2Fe-2S)-binding protein
is similar to:
PaperBLAST

C7A11_18890 / A0A1N7UJP4: 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae

43% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory