Curated BLAST for Genomes

 

Curated BLAST

Searching in Litchfieldella xinjiangensis TRM 0175 (GCF_000759345.1)

Found 1 curated entries in PaperBLAST's database that match '1.13.12.4' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Litchfieldella xinjiangensis TRM 0175, or try another query

fni JH15_RS09640 WP_052384025.1: type 2 isopentenyl-diphosphate Delta-isomerase
is similar to:
PaperBLAST

LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis

28% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory