Curated BLAST for Genomes

 

Curated BLAST

Searching in Litchfieldella xinjiangensis TRM 0175 (GCF_000759345.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Litchfieldella xinjiangensis TRM 0175, or try another query

JH15_RS10545 WP_043530030.1: acetate kinase
is similar to:
PaperBLAST

E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.

50% id,
100% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

49% id,
97% cov

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

47% id,
99% cov

More...

cphA JH15_RS03900 WP_043527207.1: cyanophycin synthetase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

41% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory