Curated BLAST for Genomes

 

Curated BLAST

Searching in Litchfieldella xinjiangensis TRM 0175 (GCF_000759345.1)

Found 32 curated entries in PaperBLAST's database that match '3.1.2.6' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Litchfieldella xinjiangensis TRM 0175, or try another query

fghA JH15_RS05910 WP_043527897.1: S-formylglutathione hydrolase
is similar to:
PaperBLAST

YeiG / b2154: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli
yeiG / P33018: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli

56% id,
100% cov

gloB JH15_RS00990 WP_043526145.1: hydroxyacylglutathione hydrolase
is similar to:
PaperBLAST

GLO2_ECOLI / P0AC84: Hydroxyacylglutathione hydrolase GloB; Glyoxalase II; Glx II; EC 3.1.2.6 from Escherichia coli
YafR / b0212: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli
gloB / MB|P0AC84: hydroxyacylglutathione hydrolase; EC 3.1.2.6 from Escherichia coli
gloB / P0AC84: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli

43% id,
100% cov

GLO2_SALTY / Q8ZRM2: Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II; EC 3.1.2.6 from Salmonella typhimurium
Q8ZRM2: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Salmonella enterica

42% id,
100% cov

Q8YZ99: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Nostoc sp.

42% id,
100% cov

More...

JH15_RS03330 WP_043526983.1: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

26% id,
89% cov

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

43% id,
26% cov

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

52% id,
13% cov

JH15_RS06525 WP_052383923.1: MBL fold metallo-hydrolase
is similar to:
PaperBLAST

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

30% id,
30% cov

JH15_RS01520 WP_043526330.1: ribonuclease J
is similar to:
PaperBLAST

GLO2_ECOLI / P0AC84: Hydroxyacylglutathione hydrolase GloB; Glyoxalase II; Glx II; EC 3.1.2.6 from Escherichia coli
YafR / b0212: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli
gloB / MB|P0AC84: hydroxyacylglutathione hydrolase; EC 3.1.2.6 from Escherichia coli
gloB / P0AC84: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli

34% id,
25% cov

GLO22_ECOLI / P75849: Hydroxyacylglutathione hydrolase GloC; Accessory type II glyoxalase; Glyoxalase II 2; GlxII-2; EC 3.1.2.6 from Escherichia coli
GloC / b0927: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli
gloC / P75849: hydroxyacylglutathione hydrolase GloC (EC 3.1.2.6) from Escherichia coli

38% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory