Curated BLAST for Genomes

 

Curated BLAST

Searching in Litchfieldella xinjiangensis TRM 0175 (GCF_000759345.1)

Found 1 curated entries in PaperBLAST's database that match '2-deoxy-3-keto-D-ribonate cleavage enzyme' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Litchfieldella xinjiangensis TRM 0175, or try another query

JH15_RS16010 WP_043532163.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

39% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory