Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermoactinomyces daqus H-18 (GCF_000763315.1)

Found 20 curated entries in PaperBLAST's database that match '3.7.1.2' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermoactinomyces daqus H-18, or try another query

JG50_RS0116895 WP_033102279.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii

37% id,
91% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

35% id,
82% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

36% id,
79% cov

More...

JG50_RS0101375 WP_033099288.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum

42% id,
80% cov

A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii

37% id,
77% cov

A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis

36% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

22886-23908 (frame +2) on NZ_JPST01000066.1 Thermoactinomyces daqus strain H-18 H_18_contig_66, whole genome shotgun sequence
is similar to:
PaperBLAST

FAH_ARATH / Q8RW90: Fumarylacetoacetase; Fumarylacetoacetate hydrolase; AtFAH; Protein SHORT-DAY SENSITIVE CELL DEATH 1; EC 3.7.1.2 from Arabidopsis thaliana
Q8RW90: fumarylacetoacetase (EC 3.7.1.2) from Arabidopsis thaliana

28% id,
86% cov

GI|2832727: fumarylacetoacetate hydrolase; EC 3.7.1.2 from Emericella nidulans

30% id,
67% cov

FAHA_ASPFU / Q4WHT8: Fumarylacetoacetase fahA; Fumarylacetoacetate hydrolase fahA; L-tyrosine degradation gene cluster protein fahA; Pyomelanin biosynthesis cluster protein fahA; EC 3.7.1.2 from Aspergillus fumigatus

30% id,
67% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory