Curated BLAST for Genomes

 

Curated BLAST

Searching in Microbacterium profundi Shh49 (GCF_000763375.1)

Found 25 curated entries in PaperBLAST's database that match '2.4.2.2' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Microbacterium profundi Shh49, or try another query

JF52_RS0112165 WP_033106832.1: thymidine phosphorylase
is similar to:
PaperBLAST

A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei

48% id,
99% cov

Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

46% id,
100% cov

Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

46% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory