Curated BLAST for Genomes

 

Curated BLAST

Searching in Lysobacter daejeonensis GH1-9 (GCF_000768355.1)

Found 18 curated entries in PaperBLAST's database that match '4.2.1.49' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Lysobacter daejeonensis GH1-9, or try another query

hutU N800_RS13305 N800_07980 WP_036139592.1: urocanate hydratase
is similar to:
PaperBLAST

HUTU_PSEPU / P25080: Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Pseudomonas putida
hutU / P25080: urocanase subunit (EC 4.2.1.49) from Pseudomonas putida

81% id,
98% cov

Pf1N1B4_1587: Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens

80% id,
97% cov

Pf6N2E2_3805: Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens

81% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory