Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Flavobacterium beibuense F44-8 (GCF_000769915.1)

Found 21 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Flavobacterium beibuense F44-8, or try another query

Q763_RS03145 Q763_03225 WP_052123206.1: NAD-dependent succinate-semialdehyde dehydrogenase is similar to:	PaperBLAST
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	48% id, 99% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	46% id, 99% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	46% id, 99% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	44% id, 100% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	42% id, 99% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	41% id, 99% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	38% id, 97% cov
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	34% id, 100% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	32% id, 97% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	33% id, 92% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	32% id, 94% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	32% id, 89% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	31% id, 91% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	28% id, 87% cov
More...

Q763_RS12615 Q763_12890 WP_198133471.1: aldehyde dehydrogenase family protein is similar to:	PaperBLAST
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	34% id, 98% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	34% id, 97% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	32% id, 97% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	33% id, 95% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	31% id, 99% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	32% id, 96% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	32% id, 97% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	32% id, 95% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	30% id, 98% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	30% id, 99% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	30% id, 95% cov
Q8YR92: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Nostoc sp.	30% id, 95% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	29% id, 94% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	29% id, 86% cov
More...

Q763_RS08225 Q763_08405 WP_035133104.1: aldehyde dehydrogenase family protein is similar to:	PaperBLAST
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	31% id, 98% cov
Q97XA5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus	30% id, 95% cov
SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp. B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.	28% id, 99% cov
Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.	28% id, 96% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	28% id, 95% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	29% id, 94% cov
sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP⁺) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans	27% id, 99% cov
A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii	28% id, 94% cov
A0A0J9X1M8: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Streptococcus pyogenes	26% id, 95% cov
A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum	25% id, 100% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	26% id, 94% cov
GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis	24% id, 99% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	25% id, 86% cov
More...

pruA Q763_RS13040 Q763_13320 WP_035135029.1: L-glutamate gamma-semialdehyde dehydrogenase is similar to:	PaperBLAST
GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis	27% id, 94% cov
GABD2_MYCTU / P9WNX7: Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2; SSADH 2; SSDH 2; EC 1.2.1.79 from Mycobacterium tuberculosis	27% id, 89% cov
GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli GabD / b2661: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79) from Escherichia coli gabD / P25526: succinate-semialdehyde dehydrogenase (NADP⁺) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli	26% id, 92% cov
A9SS48: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Physcomitrium patens	28% id, 84% cov
gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator	26% id, 87% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory