Searching in Flavobacterium beibuense F44-8 (GCF_000769915.1)
Found 17 curated entries in PaperBLAST's database that match '4.1.3.4' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Flavobacterium beibuense F44-8, or try another query
| Q763_RS05655 Q763_05760 WP_035132036.1: hydroxymethylglutaryl-CoA lyase is similar to: | PaperBLAST |
CA265_RS13115: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Pedobacter sp. | 56% id, 98% cov |
LIUE_PSEAE / Q9I2A0: 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methylglutaryl-CoA lyase; HIHG-CoA lyase; HMG-CoA lyase; (S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase; 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA acetate-lyase; EC 4.1.3.26; EC 4.1.3.4 from Pseudomonas aeruginosa | 31% id, 88% cov |
SM_b21125: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Sinorhizobium meliloti | 29% id, 92% cov |
| Q763_RS12060 Q763_12310 WP_035134606.1: enoyl-CoA hydratase/isomerase family protein is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 29% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 140219-141085 (frame +2) on NZ_JRLV01000005.1 Flavobacterium beibuense F44-8 contig6, whole genome shotgun sequence is similar to: | PaperBLAST |
CA265_RS13115: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) from Pedobacter sp. | 55% id, 99% cov |
Lawrence Berkeley National Laboratory