Curated BLAST for Genomes

 

Curated BLAST

Searching in Flavobacterium beibuense F44-8 (GCF_000769915.1)

Found 61 curated entries in PaperBLAST's database that match '5.1.3.2' as complete word(s).

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Flavobacterium beibuense F44-8, or try another query

galE Q763_RS13115 Q763_13395 WP_035135055.1: UDP-glucose 4-epimerase GalE
is similar to:		 PaperBLAST

Echvi_1472: UDP-glucose 4-epimerase (EC 5.1.3.2) from Echinicola vietnamensis

 52% id,
99% cov

GALE_BACSU / P55180: UDP-glucose 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Bacillus subtilis
galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

 52% id,
99% cov

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

 52% id,
97% cov

More...

Q763_RS00625 Q763_00635 WP_035129893.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 36% id,
100% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 32% id,
98% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

 32% id,
98% cov

More...

Q763_RS04560 Q763_04650 WP_035131670.1: UDP-glucuronic acid decarboxylase family protein
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 32% id,
99% cov

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 33% id,
97% cov

A3MUJ4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrobaculum calidifontis

 32% id,
97% cov

More...

rfbB Q763_RS04620 Q763_04710 WP_035131692.1: dTDP-glucose 4,6-dehydratase
is similar to:		 PaperBLAST

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 31% id,
100% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 29% id,
98% cov

GALE_BIFL2 / E8MF10: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Bifidobacterium longum
lnpD / GB|BAF73927.1: UDP-glucose 4-epimerase; EC 5.1.3.2 from Bifidobacterium longum

 28% id,
96% cov

More...

Q763_RS00680 Q763_00690 WP_157499248.1: nucleoside-diphosphate sugar epimerase/dehydratase
is similar to:		 PaperBLAST

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 33% id,
93% cov

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 34% id,
80% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 23% id,
84% cov

More...

Q763_RS00015 Q763_00015 WP_035129577.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

A3MUJ4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrobaculum calidifontis

 23% id,
100% cov

F6DEY6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Thermus thermophilus

 24% id,
83% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 30% id,
49% cov

Q763_RS11680 Q763_11925 WP_035134463.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

O73960: UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii

 26% id,
84% cov

rfbD Q763_RS04605 Q763_04695 WP_035131688.1: dTDP-4-dehydrorhamnose reductase
is similar to:		 PaperBLAST

UGE2_ARATH / Q9T0A7: UDP-glucose 4-epimerase 2; AtUGE2; UDP-galactose 4-epimerase 2; EC 5.1.3.2 from Arabidopsis thaliana
Q9T0A7: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Arabidopsis thaliana

 27% id,
66% cov

GALE_HAEIN / P24325: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Haemophilus influenzae

 25% id,
59% cov

UGE5_ARATH / Q9SN58: UDP-glucose 4-epimerase 5; AtUGE5; UDP-galactose 4-epimerase 5; EC 5.1.3.2 from Arabidopsis thaliana
Q9SN58: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Arabidopsis thaliana

 27% id,
54% cov

More...

Q763_RS05965 Q763_06075 WP_035132144.1: aldose epimerase family protein
is similar to:		 PaperBLAST

P04397: UDP-glucose 4-epimerase (EC 5.1.3.2) from Saccharomyces cerevisiae

 30% id,
49% cov

Q9HDU3: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schizosaccharomyces pombe

 29% id,
50% cov

Q763_RS06450 Q763_06580 WP_035132384.1: NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

GALE_LACHE / Q7WTB1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Lactobacillus helveticus

 27% id,
42% cov

Q763_RS00670 Q763_00680 WP_035129930.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

UGE1_PEA / B0M3E8: Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1; UDP-D-xylose 4-epimerase; UDP-L-arabinose 4-epimerase; UDP-galactose 4-epimerase 1; UDP-glucose 4-epimerase 1; PsUGE1; EC 5.1.3.2; EC 5.1.3.5 from Pisum sativum
B0M3E8: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Pisum sativum

 28% id,
39% cov

UGE1_ARATH / Q42605: Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1; UDP-D-xylose 4-epimerase; UDP-L-arabinose 4-epimerase; UDP-galactose 4-epimerase 1; UDP-glucose 4-epimerase 1; AtUGE1; EC 5.1.3.2; EC 5.1.3.5 from Arabidopsis thaliana
UGE1 / Q42605: UDP-D-glucose/UDP-D-galactose 4-epimerase subunit (EC 5.1.3.2) from Arabidopsis thaliana
Q42605: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Arabidopsis thaliana

 25% id,
43% cov

Q763_RS01150 Q763_01170 WP_035130188.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

Q5D9E1: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schistosoma japonicum

 28% id,
32% cov

Q763_RS05335 Q763_05430 WP_035131946.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

GALE_NEIMC / P56986: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis

 37% id,
21% cov

GALE_NEIMB / P56985: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis

 37% id,
21% cov

Q763_RS12880 Q763_13160 WP_035134981.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

A0A0H2UQY4: UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus pneumoniae

 36% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory