Curated BLAST for Genomes

 

Curated BLAST

Searching in Pontibacillus litoralis JSM 072002 (GCF_000775615.1)

Found 7 curated entries in PaperBLAST's database that match '1.14.11.64' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pontibacillus litoralis JSM 072002, or try another query

glaH N784_RS03970 N784_10715 WP_036832567.1: glutarate dioxygenase GlaH
is similar to:
PaperBLAST

GLAH_ECOLI / P76621: Glutarate 2-hydroxylase; G-2-H; Carbon starvation induced protein D; EC 1.14.11.64 from Escherichia coli
GlaH / b2659: glutarate hydroxylase GlaH (EC 1.14.11.64) from Escherichia coli
glaH / P76621: glutarate dioxygenase GlaH (EC 1.14.11.64) from Escherichia coli
P76621: glutarate dioxygenase (EC 1.14.11.64) from Escherichia coli

43% id,
93% cov

GLAH_PSEPK / Q88IU0: Glutarate 2-hydroxylase; G-2-H; EC 1.14.11.64 from Pseudomonas putida
csiD / Q88IU0: glutarate dioxygenase monomer (EC 1.14.11.64) from Pseudomonas putida
Q88IU0: glutarate dioxygenase (EC 1.14.11.64) from Pseudomonas putida

42% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory