Curated BLAST for Genomes

 

Curated BLAST

Searching in Frischella perrara PEB0191 (GCF_000807275.1)

Found 64 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Frischella perrara PEB0191, or try another query

FPB0191_RS03365 FPB0191_00683 WP_039104024.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

58% id,
99% cov

THLA_CLOAB / P45359: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; CaTHL; EC 2.3.1.9 from Clostridium acetobutylicum
P45359: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Clostridium acetobutylicum

53% id,
100% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

53% id,
100% cov

More...

FPB0191_RS02985 FPB0191_00607 WP_039103927.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

54% id,
100% cov

THIL_ALLVD / P45369: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Allochromatium vinosum

54% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

53% id,
99% cov

More...

FPB0191_RS07015 FPB0191_01416 WP_039104940.1: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
is similar to:
PaperBLAST

A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Metallosphaera sedula

26% id,
28% cov

FPB0191_RS09545 FPB0191_01928 WP_039105645.1: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
is similar to:
PaperBLAST

ERG10_CANAL / A0A1D8PH52: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Candida albicans

28% id,
22% cov

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

32% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory