Curated BLAST for Genomes

 

Curated BLAST

Searching in Frischella perrara PEB0191 (GCF_000807275.1)

Found 17 curated entries in PaperBLAST's database that match '4.2.1.82' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Frischella perrara PEB0191, or try another query

ilvD FPB0191_RS08395 FPB0191_01697 WP_039105305.1: dihydroxy-acid dehydratase
is similar to:
PaperBLAST

xylD / A0A0H3C6H6: xylonate dehydratase monomer (EC 4.2.1.82) from Caulobacter vibrioides
CCNA_00862: Xylonate dehydratase (EC 4.2.1.82) from Caulobacter crescentus

31% id,
57% cov

XYLD_CAUVC / Q9A9Z2: D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides
Q9A9Z2: xylonate dehydratase (EC 4.2.1.82) from Caulobacter vibrioides

31% id,
56% cov

AO356_28760: Xylonate dehydratase (EC 4.2.1.82) from Pseudomonas fluorescens

30% id,
59% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory