Curated BLAST for Genomes

 

Curated BLAST

Searching in Frischella perrara PEB0191 (GCF_000807275.1)

Found 29 curated entries in PaperBLAST's database that match 'sorbitol dehydrogenase' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Frischella perrara PEB0191, or try another query

fabG FPB0191_RS01165 FPB0191_00237 WP_039103405.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

34% id,
100% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

32% id,
99% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

32% id,
99% cov

More...

FPB0191_RS08270 FPB0191_01675 WP_052236884.1: glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
is similar to:
PaperBLAST

Q70JN9: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 1/2) (EC 1.1.99.21) from Gluconobacter oxydans

36% id,
90% cov

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

36% id,
86% cov

sldA / BAC02909.1: D-Sorbitol dehydrogenase from Gluconobacter oxydans

35% id,
86% cov

More...

FPB0191_RS05845 FPB0191_01181 WP_039104627.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

31% id,
100% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

31% id,
98% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

31% id,
98% cov

More...

FPB0191_RS04620 FPB0191_00939 WP_039104375.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

31% id,
97% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

28% id,
98% cov

FPB0191_RS09555 FPB0191_01930 WP_039105649.1: 3-ketoacyl-ACP reductase FabG2
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

29% id,
97% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

30% id,
96% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
96% cov

More...

FPB0191_RS07025 FPB0191_01418 WP_039104941.1: 3-oxoacyl-ACP reductase family protein
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

28% id,
98% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

27% id,
97% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
97% cov

More...

FPB0191_RS04895 FPB0191_00992 WP_039104414.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

1e3jA / O96496: Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly

32% id,
74% cov

DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus

29% id,
75% cov

DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus

29% id,
75% cov

More...

FPB0191_RS11995 WP_272866970.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

45% id,
16% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

43% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory