Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium tyrobutyricum FAM22553 (GCF_000816635.1)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Clostridium tyrobutyricum FAM22553, or try another query

PN53_RS14555 WP_017895628.1: bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

42% id,
88% cov

PN53_RS07420 WP_039652626.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

37% id,
89% cov

PN53_RS10350 WP_026093942.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

31% id,
89% cov

PN53_RS14495 WP_039653945.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

32% id,
48% cov

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

29% id,
39% cov

PN53_RS15150 WP_039654102.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

36% id,
39% cov

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

36% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

15487-16704 (frame -1) on NZ_JTES01000025.1 Clostridium tyrobutyricum strain FAM22553 scaffold0025, whole genome shotgun sequence
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea
Also see hits to annotated proteins above

41% id,
91% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory