Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 10 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

hisD SUTH_RS14175 SUTH_02847 WP_041100155.1: histidinol dehydrogenase
is similar to:
PaperBLAST

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

52% id,
100% cov

HISX_MYCTU / P9WNW9: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis
P9WNW9: histidinol dehydrogenase (EC 1.1.1.23) from Mycobacterium tuberculosis

43% id,
95% cov

HISX_ECOLI / P06988: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli
hisD / P06988: histidinal/histidinol dehydrogenase (EC 1.1.1.23) from Escherichia coli

42% id,
93% cov

More...

hisI SUTH_RS14125 SUTH_02838 WP_041100141.1: phosphoribosyl-AMP cyclohydrolase
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

33% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory