Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS08465 SUTH_01706 WP_041098540.1: amino acid aminotransferase
is similar to:		 PaperBLAST

W0PFQ7: aspartate transaminase (EC 2.6.1.1) from Advenella mimigardefordensis

 67% id,
100% cov

pat / Q5P8C9: aromatic-amino-acid aminotransferase (EC 2.6.1.1) from Aromatoleum aromaticum

 53% id,
99% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli
tyrB / P04693: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.1) from Escherichia coli

 52% id,
100% cov

More...

SUTH_RS04050 SUTH_00814 WP_041097288.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 47% id,
97% cov

hisC SUTH_RS09875 SUTH_01990 WP_041098942.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 38% id,
100% cov

AAT_MUSP7 / C6C2Z3: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca

 26% id,
59% cov

mASAT: aspartate aminotransferase; EC 2.6.1.1 from Trypanosoma cruzi
Q4D1Q4: aspartate transaminase (EC 2.6.1.1) from Trypanosoma cruzi

 29% id,
31% cov

SUTH_RS17520 SUTH_03522 WP_041101095.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 35% id,
96% cov

SUTH_RS14945 SUTH_03001 WP_041100371.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 34% id,
100% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 33% id,
100% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 33% id,
99% cov

More...

hisC SUTH_RS14150 SUTH_02843 WP_041100149.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 30% id,
98% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 26% id,
63% cov

SUTH_RS07520 SUTH_01511 WP_041101949.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 30% id,
95% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 30% id,
95% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 30% id,
95% cov

More...

SUTH_RS15085 SUTH_03030 WP_041100392.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 30% id,
95% cov

AAT_RHIML / Q06191: Aspartate aminotransferase; AAT; AspAT; Transaminase A; EC 2.6.1.1 from Rhizobium meliloti

 30% id,
95% cov

AAPAT_CERS1 / A3PMF8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Cereibacter sphaeroides

 31% id,
92% cov

More...

SUTH_RS17800 SUTH_03578 WP_041101173.1: PatB family C-S lyase
is similar to:		 PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 25% id,
96% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 25% id,
94% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 22% id,
96% cov

More...

SUTH_RS01185 SUTH_00240 WP_041096436.1: D-amino acid aminotransferase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 33% id,
50% cov

rffA SUTH_RS04980 SUTH_01001 WP_041101715.1: dTDP-4-amino-4,6-dideoxygalactose transaminase
is similar to:		 PaperBLAST

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

 26% id,
50% cov

AAPAT_NITEU / Q82WA8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea

 31% id,
30% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 33% id,
27% cov

More...

dapC SUTH_RS08365 SUTH_01685 WP_041101994.1: succinyldiaminopimelate transaminase
is similar to:		 PaperBLAST

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

 23% id,
48% cov

SUTH_RS16820 SUTH_03378 WP_041100905.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 25% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

825972-827477 (frame -3) on NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H strain DSM 22779 chromosome, complete genome
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
Also see hits to annotated proteins above

 47% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory