Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS08465 SUTH_01706 WP_041098540.1: amino acid aminotransferase
is similar to:
PaperBLAST

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

52% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

50% id,
100% cov

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

48% id,
100% cov

hemL SUTH_RS17015 SUTH_03417 WP_041100966.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

36% id,
93% cov

SUTH_RS07520 SUTH_01511 WP_041101949.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

27% id,
92% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
98% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
92% cov

More...

SUTH_RS14945 SUTH_03001 WP_041100371.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

25% id,
93% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
88% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

25% id,
93% cov

More...

SUTH_RS15085 SUTH_03030 WP_041100392.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

25% id,
91% cov

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
87% cov

TAT_ARATH / Q9LVY1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Arabidopsis thaliana
Q9LVY1: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

24% id,
85% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3129220-3130494 (frame +1) on NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H strain DSM 22779 chromosome, complete genome
is similar to:
PaperBLAST

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana
Also see hits to annotated proteins above

24% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory