Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS02930 SUTH_00590 WP_148312838.1: shikimate kinase
is similar to:
PaperBLAST

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

56% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory