Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS00670 SUTH_00136 WP_041096303.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

52% id,
83% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

53% id,
79% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
96% cov

More...

glk SUTH_RS15770 SUTH_03169 WP_041100583.1: glucokinase
is similar to:
PaperBLAST

G4T1H4: glucokinase (EC 2.7.1.2) from Methylotuvimicrobium alcaliphilum

33% id,
99% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

34% id,
95% cov

A0A3G4RI75: glucokinase (EC 2.7.1.2) from Methylomonas methanica

32% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory