Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

purT SUTH_RS02745 SUTH_00555 WP_041096914.1: formate-dependent phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

57% id,
98% cov

SUTH_RS10370 SUTH_02089 WP_041099069.1: acetate/propionate family kinase
is similar to:
PaperBLAST

B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis

38% id,
99% cov

G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum

39% id,
97% cov

A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis

38% id,
98% cov

More...

SUTH_RS03940 SUTH_00792 WP_041097254.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli

27% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory