Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS11835 SUTH_02375 WP_041099485.1: aspartate kinase
is similar to:
PaperBLAST

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

70% id,
99% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

69% id,
99% cov

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

69% id,
99% cov

More...

SUTH_RS07530 SUTH_01513 WP_041098312.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

35% id,
53% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

28% id,
30% cov

lysA SUTH_RS02885 SUTH_00582 WP_041096945.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

37% id,
42% cov

pyrH SUTH_RS11310 SUTH_02273 WP_041099335.1: UMP kinase
is similar to:
PaperBLAST

AK_PSEPK / Q88EI9: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas putida

25% id,
56% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

24% id,
56% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

26% id,
52% cov

More...

proB SUTH_RS15450 SUTH_03103 WP_041100488.1: glutamate 5-kinase
is similar to:
PaperBLAST

dapG: aspartate kinase 1; EC 2.7.2.4 from Bacillus subtilis

25% id,
46% cov

dapG / Q04795: aspartokinase I (alpha and beta subunits) (EC 2.7.2.4) from Bacillus subtilis

25% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory