Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

argB SUTH_RS01670 SUTH_00338 WP_041096596.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

62% id,
99% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

50% id,
97% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

49% id,
92% cov

More...

argA SUTH_RS03725 SUTH_00749 WP_052473176.1: amino-acid N-acetyltransferase
is similar to:
PaperBLAST

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

35% id,
95% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

31% id,
92% cov

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

28% id,
97% cov

More...

SUTH_RS11835 SUTH_02375 WP_041099485.1: aspartate kinase
is similar to:
PaperBLAST

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

24% id,
90% cov

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

23% id,
72% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

23% id,
67% cov

pyrH SUTH_RS11310 SUTH_02273 WP_041099335.1: UMP kinase
is similar to:
PaperBLAST

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

24% id,
71% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

24% id,
66% cov

ARGB_MYCTU / P9WQ01: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Mycobacterium tuberculosis

44% id,
12% cov

argC SUTH_RS15540 SUTH_03121 WP_041100505.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

30% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3264469-3265770 (frame -2) on NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H strain DSM 22779 chromosome, complete genome
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

27% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory