Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

thrC SUTH_RS07545 SUTH_01516 WP_041098315.1: threonine synthase
is similar to:
PaperBLAST

Q2SWH9: threonine synthase (EC 4.2.3.1) from Burkholderia thailandensis

71% id,
99% cov

THRC_CORGL / P23669: Threonine synthase; TS; EC 4.2.3.1 from Corynebacterium glutamicum

60% id,
98% cov

Q8YFS0: threonine synthase (EC 4.2.3.1) from Brucella melitensis

42% id,
99% cov

More...

ilvA SUTH_RS17910 SUTH_03598 WP_041101209.1: threonine ammonia-lyase, biosynthetic
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

27% id,
83% cov

SUTH_RS00155 SUTH_00033 WP_041096142.1: TrpB-like pyridoxal phosphate-dependent enzyme
is similar to:
PaperBLAST

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

25% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory