Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 21 curated entries in PaperBLAST's database that match '6.3.4.5' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS05540 SUTH_01115 WP_041101760.1: argininosuccinate synthase
is similar to:		 PaperBLAST

ASSY_THET8 / P59846: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Thermus thermophilus

 62% id,
98% cov

S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens

 50% id,
94% cov

H9BG20: argininosuccinate synthase (EC 6.3.4.5) from Leishmania donovani

 50% id,
94% cov

More...

mnmA SUTH_RS04060 SUTH_00816 WP_041097292.1: tRNA 2-thiouridine(34) synthase MnmA
is similar to:		 PaperBLAST

ARG1: argininosuccinate synthase; EC 6.3.4.5 from Candida albicans

 30% id,
21% cov

ASSY_YEAST / P22768: Argininosuccinate synthase; Citrulline--aspartate ligase; EC 6.3.4.5 from Saccharomyces cerevisiae

 36% id,
16% cov

S4V5K7: argininosuccinate synthase (EC 6.3.4.5) from Protopterus annectens

 33% id,
16% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory