Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfuritalea hydrogenivorans sk43H DSM 22779 (GCF_000828635.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sulfuritalea hydrogenivorans sk43H DSM 22779, or try another query

SUTH_RS14340 SUTH_02880 WP_041100201.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

67% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

60% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

46% id,
99% cov

carA SUTH_RS06645 SUTH_01339 WP_041098069.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

28% id,
94% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

30% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory