Curated BLAST for Genomes

 

Curated BLAST

Searching in Jannaschia aquimarina GSW-M26 (GCF_000877395.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Jannaschia aquimarina GSW-M26, or try another query

jaqu_RS12650 jaqu_25620 WP_043919360.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

 52% id,
85% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 44% id,
99% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 42% id,
100% cov

More...

jaqu_RS05030 jaqu_10100 WP_043917847.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
99% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 30% id,
98% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 30% id,
100% cov

More...

jaqu_RS03200 jaqu_06440 WP_089268343.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 32% id,
96% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 30% id,
98% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 31% id,
96% cov

jaqu_RS17800 jaqu_36020 WP_043920361.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 32% id,
95% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
95% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 31% id,
96% cov

More...

jaqu_RS01850 jaqu_03730 WP_043917240.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 42% id,
68% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 37% id,
77% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 37% id,
68% cov

More...

jaqu_RS10020 jaqu_20240 WP_043918837.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 29% id,
97% cov

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 32% id,
84% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 28% id,
86% cov

More...

jaqu_RS00375 jaqu_00760 WP_043916947.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

 37% id,
69% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

 31% id,
74% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

 32% id,
69% cov

More...

jaqu_RS01085 jaqu_02210 WP_043917086.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula
A4YDS4: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Metallosphaera sedula

 32% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

23457-24248 (frame -2) on NZ_JYFE01000046.1 Jannaschia aquimarina strain GSW-M26 jaqu_contig000046, whole genome shotgun sequence
is similar to:		 PaperBLAST

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus
Also see hits to annotated proteins above

 51% id,
91% cov

Q9WTK2: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Mus musculus
Also see hits to annotated proteins above

 25% id,
45% cov

Q9Y232: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Homo sapiens
Also see hits to annotated proteins above

 25% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory