Curated BLAST for Genomes

 

Curated BLAST

Searching in Jannaschia aquimarina GSW-M26 (GCF_000877395.1)

Found 62 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Jannaschia aquimarina GSW-M26, or try another query

jaqu_RS12650 jaqu_25620 WP_043919360.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

 60% id,
100% cov

BPHYT_RS17335: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans

 60% id,
100% cov

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

 57% id,
100% cov

More...

jaqu_RS05030 jaqu_10100 WP_043917847.1: enoyl-CoA hydratase-related protein
is similar to:		 PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

 45% id,
96% cov

paaG / MB|P77467: putative enoyl-CoA hydratase PaaG; EC 4.2.1.17 from Escherichia coli

 45% id,
96% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

 35% id,
100% cov

More...

jaqu_RS01850 jaqu_03730 WP_043917240.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

ECHP_MOUSE / Q9DBM2: Peroxisomal bifunctional enzyme; PBE; PBFE; L-peroxisomal bifunctional enzyme; L-PBE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP-1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Mus musculus

 39% id,
96% cov

ECHP_RAT / P07896: Peroxisomal bifunctional enzyme; PBE; PBFE; Multifunctional enzyme 1; MFE1; Multifunctional protein 1; MFP1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Rattus norvegicus
Ehhadh / RF|NP_598290.1: noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35; EC 4.2.1.17; EC 5.3.3.8 from Rattus norvegicus
P07896: enoyl-CoA hydratase (EC 4.2.1.17) from Rattus norvegicus

 38% id,
96% cov

ECHP_HUMAN / Q08426: Peroxisomal bifunctional enzyme; PBE; PBFE; L-bifunctional protein; LBP; Multifunctional enzyme 1; MFE1; EC 4.2.1.17; EC 5.3.3.8; EC 1.1.1.35 from Homo sapiens
EHHADH / Q08426: peroxisomal bifunctional enzyme (EC 4.2.1.17; EC 1.1.1.35) from Homo sapiens

 37% id,
97% cov

More...

jaqu_RS00375 jaqu_00760 WP_043916947.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:		 PaperBLAST

FADJ_ECOLI / P77399: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 1.1.1.35 from Escherichia coli
FadJ / b2341: 3-hydroxyacyl-CoA dehydrogenase FadJ (EC 1.1.1.35; EC 1.1.1.211; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli
fadJ / RF|NP_416843: fatty acid oxidation complex subunit alpha; EC 1.1.1.35; EC 4.2.1.17; EC 5.1.2.3 from Escherichia coli
fadJ / P77399: multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxyacyl-CoA epimerase/enoyl-CoA hydratase FadJ (EC 1.1.1.35; EC 4.2.1.17; EC 4.2.1.74; EC 5.1.2.3; EC 5.3.3.8) from Escherichia coli

 37% id,
99% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

 34% id,
99% cov

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

 34% id,
98% cov

More...

jaqu_RS03200 jaqu_06440 WP_089268343.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

H16_A3593 / Q0K5S0: enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator

 36% id,
99% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

 36% id,
94% cov

paaF / Q845K2: 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp.

 34% id,
99% cov

More...

jaqu_RS17800 jaqu_36020 WP_043920361.1: enoyl-CoA hydratase
is similar to:		 PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

 35% id,
98% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

 35% id,
96% cov

DPGD_AMYOR / G4V4T7: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

 34% id,
99% cov

More...

jaqu_RS10020 jaqu_20240 WP_043918837.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

Psest_2437: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri

 31% id,
91% cov

Q9SE41: enoyl-CoA hydratase (EC 4.2.1.17) from Avicennia marina

 30% id,
90% cov

H281DRAFT_05725: 2,3-dehydroadipyl-CoA hydratase / enoyl-CoA hydratase (EC 4.2.1.17) from Paraburkholderia bryophila

 31% id,
85% cov

More...

jaqu_RS07385 jaqu_14870 WP_043918322.1: enoyl-CoA hydratase/isomerase family protein
is similar to:		 PaperBLAST

DPGB_AMYOR / G4V4T5: Enoyl-CoA-hydratase; EC 4.2.1.17 from Amycolatopsis orientalis

 32% id,
76% cov

FADB_BACSU / P94549: Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis

 30% id,
67% cov

ACTT3_ALTAL / Q589W8: Enoyl-CoA hydratase ACTT3; ACT-toxin biosynthesis protein 3; EC 4.2.1.17 from Alternaria alternata

 29% id,
69% cov

More...

jaqu_RS01085 jaqu_02210 WP_043917086.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:		 PaperBLAST

fadB / Q88L02: FadB (EC 5.3.3.8; EC 1.1.1.35; EC 5.1.2.3; EC 4.2.1.17; EC 1.1.1.36) from Pseudomonas putida

 35% id,
40% cov

Sama_0032: Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Shewanella amazonensis

 35% id,
39% cov

FADB_PSEFR / P28793: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 5.3.3.8; EC 1.1.1.35 from Pseudomonas fragi

 34% id,
39% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory