Curated BLAST for Genomes

 

Curated BLAST

Searching in Jannaschia aquimarina GSW-M26 (GCF_000877395.1)

Found 61 curated entries in PaperBLAST's database that match '5.1.3.2' as complete word(s).

These curated entries have 42 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Jannaschia aquimarina GSW-M26, or try another query

galE jaqu_RS04770 jaqu_09560 WP_043917800.1: UDP-glucose 4-epimerase GalE
is similar to:		 PaperBLAST

GALE_BACSU / P55180: UDP-glucose 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Bacillus subtilis
galE / P55180: UDP-glucose 4-epimerase (EC 5.1.3.7; EC 5.1.3.2) from Bacillus subtilis

 53% id,
99% cov

GALE_NEIMB / P56985: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis

 52% id,
99% cov

GALE_NEIMC / P56986: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis

 52% id,
99% cov

More...

rfbB jaqu_RS13085 jaqu_26460 WP_043919447.1: dTDP-glucose 4,6-dehydratase
is similar to:		 PaperBLAST

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 35% id,
99% cov

F2NQX6: UDP-glucose 4-epimerase (EC 5.1.3.2) from Marinithermus hydrothermalis

 35% id,
98% cov

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 34% id,
98% cov

More...

jaqu_RS00575 jaqu_01160 WP_043916981.1: aldehyde reductase
is similar to:		 PaperBLAST

GALE_MYCS2 / A0R5C5: UDP-glucose 4-epimerase; UDP-galactose 4-epimerase; Uridine diphosphate galactose 4-epimerase; EC 5.1.3.2 from Mycolicibacterium smegmatis

 30% id,
93% cov

galE1 / P9WN67: UDP-galactose/glucose 4-epimerase subunit (EC 5.1.3.7; EC 5.1.3.2) from Mycobacterium tuberculosis
P9WN67: UDP-glucose 4-epimerase (EC 5.1.3.2) from Mycobacterium tuberculosis

 31% id,
72% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 24% id,
91% cov

More...

jaqu_RS17160 jaqu_34650 WP_043920189.1: NAD-dependent epimerase/dehydratase family protein
is similar to:		 PaperBLAST

GALE_CAEEL / Q564Q1: UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-GalNAc 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-GlcNAc 4-epimerase; UDP-galactose 4-epimerase; EC 5.1.3.2; EC 5.1.3.7 from Caenorhabditis elegans

 28% id,
97% cov

Q9WYX9: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Thermotoga maritima

 26% id,
98% cov

UGE3_ARATH / Q8LDN8: Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3; UDP-D-xylose 4-epimerase; UDP-L-arabinose 4-epimerase; UDP-galactose 4-epimerase 3; UDP-glucose 4-epimerase 3; AtUGE3; EC 5.1.3.2; EC 5.1.3.5 from Arabidopsis thaliana
Q8LDN8: UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-arabinose 4-epimerase (EC 5.1.3.5) from Arabidopsis thaliana

 27% id,
92% cov

More...

jaqu_RS07285 jaqu_14670 WP_236687809.1: nucleoside-diphosphate sugar epimerase/dehydratase
is similar to:		 PaperBLAST

V5RBP5: UDP-glucose 4-epimerase (EC 5.1.3.2) from Acinetobacter baumannii

 32% id,
77% cov

CAPD_RICPR / Q9ZDJ5: UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Rickettsia prowazekii

 31% id,
78% cov

jaqu_RS19040 jaqu_38570 WP_043920591.1: aldose epimerase family protein
is similar to:		 PaperBLAST

P04397: UDP-glucose 4-epimerase (EC 5.1.3.2) from Saccharomyces cerevisiae

 29% id,
46% cov

Q9HDU3: UDP-glucose 4-epimerase (EC 5.1.3.2) from Schizosaccharomyces pombe

 26% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory