Searching in Thiomicrospira microaerophila ASL8-2 (GCF_000934765.1)
Found 51 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).
These curated entries have 41 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Thiomicrospira microaerophila ASL8-2, or try another query
| NA59_RS09195 WP_044411371.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 25% id, 67% cov |
| NA59_RS04370 WP_198401048.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus | 24% id, 62% cov |
O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 36% id, 19% cov |
O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii | 35% id, 17% cov |
| NA59_RS05855 WP_044409454.1: NAD-dependent succinate-semialdehyde dehydrogenase is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 26% id, 43% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 27% id, 41% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 25% id, 42% cov |
| lpdA NA59_RS06200 WP_044409618.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 43% id, 13% cov |
| NA59_RS01765 WP_044406987.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 38% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 61530-62969 (frame +3) on NZ_JYNN01000011.1 Thiomicrospira microaerophila strain ASL8-2 NA59DRAFT_scaffold00010.10_C, whole genome shotgun sequence is similar to: | PaperBLAST |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 26% id, 45% cov |
Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri | 27% id, 42% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 25% id, 44% cov |
Lawrence Berkeley National Laboratory