Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrospira microaerophila ASL8-2 (GCF_000934765.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Thiomicrospira microaerophila ASL8-2, or try another query

NA59_RS06170 WP_044409599.1: aspartate kinase
is similar to:
PaperBLAST

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

68% id,
98% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

68% id,
98% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

68% id,
98% cov

More...

NA59_RS00230 WP_044406131.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

39% id,
42% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

29% id,
30% cov

AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana

28% id,
23% cov

lysA NA59_RS07115 WP_044410197.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

29% id,
43% cov

pyrH NA59_RS09030 WP_044411275.1: UMP kinase
is similar to:
PaperBLAST

AK_CORFL / P41398: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens
lysC / GB|AAA23293.1: aspartate kinase; EC 2.7.2.4 from Corynebacterium flavescens

24% id,
37% cov

AK_CORGL / P26512: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Corynebacterium glutamicum
lysC: aspartate kinase 2; EC 2.7.2.4 from Corynebacterium glutamicum
lysCα / P26512: aspartokinase α subunit (EC 2.7.2.4) from Corynebacterium glutamicum
lysCβ / P26512: aspartokinase β subunit (EC 2.7.2.4) from Corynebacterium glutamicum
P26512: aspartate kinase (EC 2.7.2.4) from Corynebacterium glutamicum

24% id,
37% cov

AK_YEAST / P10869: Aspartokinase; Aspartate kinase; EC 2.7.2.4 from Saccharomyces cerevisiae
P10869: aspartate kinase (EC 2.7.2.4) from Saccharomyces cerevisiae

27% id,
32% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory