Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Thiomicrospira microaerophila ASL8-2 (GCF_000934765.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thiomicrospira microaerophila ASL8-2, or try another query

NA59_RS03540 WP_044408107.1: N-acetylglutaminylglutamine amidotransferase is similar to:	PaperBLAST
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	32% id, 99% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 95% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	28% id, 89% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	28% id, 85% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 83% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	27% id, 83% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	25% id, 89% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	38% id, 56% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	36% id, 60% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	28% id, 77% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 77% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 77% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	28% id, 75% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	29% id, 70% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	29% id, 70% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	25% id, 77% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	30% id, 46% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	30% id, 47% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	28% id, 49% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	29% id, 46% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	27% id, 48% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	28% id, 46% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	27% id, 46% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	31% id, 40% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	27% id, 46% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	26% id, 47% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	38% id, 30% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	27% id, 40% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	32% id, 32% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	29% id, 34% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	32% id, 31% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	33% id, 29% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	35% id, 26% cov
Q2L9S5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Bombyx mori	31% id, 27% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	30% id, 27% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	28% id, 28% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	28% id, 28% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	27% id, 29% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	28% id, 27% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	29% id, 23% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	30% id, 21% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	30% id, 21% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	30% id, 20% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	35% id, 16% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	28% id, 19% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	30% id, 17% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	29% id, 17% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	30% id, 16% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	30% id, 16% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	32% id, 15% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	38% id, 13% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	38% id, 12% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	36% id, 13% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	35% id, 13% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	35% id, 13% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	34% id, 13% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	34% id, 13% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	34% id, 13% cov
More...

glmS NA59_RS03730 WP_044408212.1: glutamine--fructose-6-phosphate transaminase (isomerizing) is similar to:	PaperBLAST
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	28% id, 19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory