Curated BLAST for Genomes

 

Curated BLAST

Searching in Thiomicrospira microaerophila ASL8-2 (GCF_000934765.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxybutanoate synthase, catalytic subunit' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Thiomicrospira microaerophila ASL8-2, or try another query

NA59_RS05240 WP_044409083.1: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

59% id,
99% cov

NA59_RS04820 WP_044408795.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

33% id,
98% cov

NA59_RS13570 WP_044414029.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

IlvI / b0077: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli
ilvI / P00893: acetolactate synthase / acetohydroxybutanoate synthase, catalytic subunit (EC 2.2.1.6) from Escherichia coli

34% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory