Curated BLAST for Genomes

 

Curated BLAST

Searching in Photobacterium gaetbulicola Gung47 (GCF_000940995.1)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Photobacterium gaetbulicola Gung47, or try another query

H744_RS05370 H744_1c1082 WP_044621286.1: aldolase
is similar to:
PaperBLAST

FUCA_METJA / Q58813: L-fuculose phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Methanocaldococcus jannaschii
MJ1418 / Q58813: fuculose-1-phosphate aldolase subunit (EC 4.1.2.17) from Methanocaldococcus jannaschii
Q58813: L-fuculose-phosphate aldolase (EC 4.1.2.17) from Methanocaldococcus jannaschii

39% id,
96% cov

BT1274: L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron

32% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory