Searching in Oleispira antarctica RB-8 (GCF_000967895.1)
Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Oleispira antarctica RB-8, or try another query
| OLEAN_RS00125 OLEAN_C00250 WP_046007531.1: shikimate dehydrogenase is similar to: | PaperBLAST |
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida | 60% id, 99% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 51% id, 97% cov |
AROE_ECOLI / P15770: Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Escherichia coli | 47% id, 99% cov |
| OLEAN_RS02470 OLEAN_C04820 WP_046007916.1: glutamyl-tRNA reductase is similar to: | PaperBLAST |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 30% id, 47% cov |
AROE_VIBCH / Q9KVT3: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae | 31% id, 38% cov |
A0A168S2B8: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Vitis vinifera | 31% id, 14% cov |
| OLEAN_RS18420 OLEAN_C36340 WP_046010453.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 36% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 39% id, 13% cov |
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii | 38% id, 4% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory