Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Oleispira antarctica RB-8 (GCF_000967895.1)

Found 36 curated entries in PaperBLAST's database that match '2.6.1.83' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Oleispira antarctica RB-8, or try another query

OLEAN_RS07170 OLEAN_C14170 WP_046008665.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus	30% id, 98% cov
DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica	28% id, 99% cov
Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans	28% id, 98% cov
Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis	27% id, 99% cov
DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans	27% id, 98% cov
DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus	26% id, 98% cov
DAPAT_METJA / Q58786: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanocaldococcus jannaschii dapL / Q58786: L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanocaldococcus jannaschii	23% id, 85% cov
DAPAT_METMP / Q6LX26: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanococcus maripaludis	23% id, 83% cov
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OLEAN_RS04885 OLEAN_C09640 WP_046008304.1: succinyldiaminopimelate transaminase is similar to:	PaperBLAST
O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus	30% id, 98% cov
DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans	30% id, 97% cov
DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus	30% id, 96% cov
DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica	29% id, 97% cov
Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis	29% id, 97% cov
DAPAT_SYNY3 / Q55828: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Synechocystis sp. Q55828: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Synechocystis sp.	24% id, 98% cov
A0A6P3CW87: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum	24% id, 99% cov
Q74GT3: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Geobacter sulfurreducens	24% id, 99% cov
Q3MAL4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis	23% id, 98% cov
Q2NFU1: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosphaera stadtmanae	25% id, 92% cov
DAPAT_ACET2 / A3DK17: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Acetivibrio thermocellus	25% id, 92% cov
DAPAT_PARUW / Q6MDE0: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Protochlamydia amoebophila Q6MDE0: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Candidatus Protochlamydia	23% id, 97% cov
DAPAT_METTH / O26158: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanothermobacter thermautotrophicus O26158: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanothermobacter thermautotrophicus	23% id, 92% cov
DAPAT_BACFN / Q5LC03: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Bacteroides fragilis Q5LC03: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Bacteroides fragilis	24% id, 91% cov
A8IW39: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydomonas reinhardtii	22% id, 90% cov
DAPAT_LEPIC / Q72NJ3: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Leptospira interrogans Q72NJ3: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Leptospira interrogans	24% id, 78% cov
Q9ZQI7: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana	21% id, 87% cov
DAPAT_ARATH / Q93ZN9: LL-diaminopimelate aminotransferase, chloroplastic; AtDAP-AT; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; Protein ABERRANT GROWTH AND DEATH 2; EC 2.6.1.83 from Arabidopsis thaliana DAP / Q93ZN9: L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana Q93ZN9: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana	23% id, 57% cov
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OLEAN_RS17845 OLEAN_C35180 WP_084687626.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis	29% id, 98% cov
DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica	28% id, 98% cov
DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans	28% id, 98% cov
DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus	27% id, 97% cov
DAPAT_METJA / Q58786: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanocaldococcus jannaschii dapL / Q58786: L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanocaldococcus jannaschii	24% id, 87% cov
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OLEAN_RS11520 OLEAN_C22680 WP_046009351.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica	28% id, 98% cov
DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus	27% id, 91% cov
Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis	26% id, 91% cov
DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans	25% id, 92% cov
A0A6P3CW87: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum	23% id, 63% cov
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OLEAN_RS07040 OLEAN_C13920 WP_046010916.1: histidinol-phosphate transaminase is similar to:	PaperBLAST
Q2NFU1: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosphaera stadtmanae	20% id, 81% cov
DAPAT_BACFN / Q5LC03: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Bacteroides fragilis Q5LC03: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Bacteroides fragilis	25% id, 60% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory