Curated BLAST for Genomes

 

Curated BLAST

Searching in Oleispira antarctica RB-8 (GCF_000967895.1)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Oleispira antarctica RB-8, or try another query

OLEAN_RS08490 OLEAN_C16750 WP_046008874.1: carbohydrate kinase
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

27% id,
97% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

26% id,
99% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
99% cov

More...

OLEAN_RS06380 OLEAN_C12650 WP_046008539.1: glycerol kinase GlpK
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

26% id,
94% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

24% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory