Searching in Oleispira antarctica RB-8 (GCF_000967895.1)
Found 32 curated entries in PaperBLAST's database that match '2.7.1.71' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Oleispira antarctica RB-8, or try another query
| OLEAN_RS18425 OLEAN_C36350 WP_046010454.1: shikimate kinase AroK is similar to: | PaperBLAST |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 55% id, 100% cov |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 54% id, 94% cov |
AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis | 43% id, 91% cov |
| OLEAN_RS10385 OLEAN_C20500 WP_046009179.1: endopeptidase La is similar to: | PaperBLAST |
AROL_ECOLI / P0A6E1: Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Escherichia coli | 26% id, 66% cov |
| OLEAN_RS18420 OLEAN_C36340 WP_046010453.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 36% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 39% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory