Searching in Oleispira antarctica RB-8 (GCF_000967895.1)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Oleispira antarctica RB-8, or try another query
| OLEAN_RS18790 OLEAN_C37070 WP_046010509.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 63% id, 100% cov |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 46% id, 97% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 42% id, 97% cov |
| OLEAN_RS12315 OLEAN_C24270 WP_046011108.1: biosynthetic arginine decarboxylase is similar to: | PaperBLAST |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 24% id, 69% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 24% id, 64% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 24% id, 64% cov |
| OLEAN_RS03540 OLEAN_C07000 WP_046008090.1: biosynthetic arginine decarboxylase is similar to: | PaperBLAST |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 25% id, 63% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 25% id, 63% cov |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 23% id, 66% cov |
| OLEAN_RS14300 OLEAN_C28170 WP_046009782.1: aspartate kinase is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 25% id, 46% cov |
| OLEAN_RS15785 OLEAN_C31090 WP_046011231.1: aspartate kinase is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 24% id, 40% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory