Curated BLAST for Genomes

 

Curated BLAST

Searching in Oleispira antarctica RB-8 (GCF_000967895.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.44' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Oleispira antarctica RB-8, or try another query

OLEAN_RS12275 OLEAN_C24190 WP_046009468.1: sugar phosphate isomerase/epimerase
is similar to:
PaperBLAST

PGA1_c07270: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Phaeobacter inhibens

27% id,
66% cov

SMc00433: Myo-inosose-2 dehydratase (EC 4.2.1.44) from Sinorhizobium meliloti

24% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory