Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylotuvimicrobium alcaliphilum 20Z (GCF_000968535.2)

Found 42 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylotuvimicrobium alcaliphilum 20Z, or try another query

MEALZ_RS10840 MEALZ_2210 WP_014148683.1: NAD-glutamate dehydrogenase domain-containing protein
is similar to:
PaperBLAST

DHE2_MYCS2 / A0R1C2: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Mycolicibacterium smegmatis
A0R1C2: glutamate dehydrogenase (EC 1.4.1.2) from Mycolicibacterium smegmatis

34% id,
97% cov

Psest_1944: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas stutzeri

33% id,
99% cov

DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa

32% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory